STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_00583.1Ph domain protein. (836 aa)    
Predicted Functional Partners:
LCOR_03193.1
Ribosomal protein l15.
   
 
 0.860
LCOR_10055.1
Tyrosine--tRNA ligase.
  
 
 0.833
LCOR_01400.1
S15 ns1 rna-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.827
LCOR_04234.1
Mitochondrial 37s ribosomal protein mrp2.
   
 
 0.820
LCOR_03119.1
Translation initiation factor if-2.
  
 0.811
LCOR_07512.1
Aminoacyl trna synthase complex-interactingmultifunctional protein 1-like.
  
 
 0.810
LCOR_10732.1
Mitochondrial ribosomal protein l11; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.787
LCOR_04844.1
50s ribosomal protein l3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.775
LCOR_07271.1
Candidate mitochondrial 50s ribosomal proteinl22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.763
LCOR_03996.1
Uncharacterized protein.
  
   0.749
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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