STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_00461.1Rho gtpase activator. (1137 aa)    
Predicted Functional Partners:
LCOR_00336.1
Gtp-binding protein rho3.
    
 0.860
LCOR_00460.1
Uncharacterized protein.
    
 0.860
LCOR_01683.1
Cc42_canal cell division control protein 42.
    
 0.860
LCOR_02347.1
Rho1p.
    
 0.860
LCOR_02753.1
Gtp-binding protein rhoa.
    
 0.860
LCOR_02891.1
CigA protein.
    
 0.860
LCOR_04024.1
Ras-related c3 botulinum toxin substrate 1 (Rhosmall gtp binding protein rac1).
    
 0.860
LCOR_04686.1
Ras-related c3 botulinum toxin substrate 1 (Rhosmall gtp binding protein rac1).
    
 0.860
LCOR_05840.1
Rho gtpase rho1.
    
 0.860
LCOR_07636.1
Cc42_canal cell division control protein 42.
    
 0.860
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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