Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LCOR_00472.1 | LCOR_01015.1 | A0A068RG50 | A0A068RHR6 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Uncharacterized protein. | 0.938 |
LCOR_00472.1 | LCOR_02137.1 | A0A068RG50 | A0A068RL39 | Dna-directed rna polymerases and iii subunitrpabc2-like. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
LCOR_00472.1 | LCOR_03376.1 | A0A068RG50 | A0A068RS65 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Dna-directed rna polymerase ii subunit rpb4-like. | 0.999 |
LCOR_00472.1 | LCOR_03400.1 | A0A068RG50 | A0A068RNT8 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Rna polymerase rpb3 rpb11 dimerization domain-containing protein. | 0.999 |
LCOR_00472.1 | LCOR_05567.1 | A0A068RG50 | A0A068RVV9 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Rna polymerase ii core subunit. | 0.999 |
LCOR_00472.1 | LCOR_05654.1 | A0A068RG50 | A0A068RZH9 | Dna-directed rna polymerases and iii subunitrpabc2-like. | BTP domain-containing protein. | 0.880 |
LCOR_00472.1 | LCOR_09110.1 | A0A068RG50 | A0A068S7H8 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.988 |
LCOR_00472.1 | LCOR_09210.1 | A0A068RG50 | A0A068S955 | Dna-directed rna polymerases and iii subunitrpabc2-like. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
LCOR_01015.1 | LCOR_00472.1 | A0A068RHR6 | A0A068RG50 | Uncharacterized protein. | Dna-directed rna polymerases and iii subunitrpabc2-like. | 0.938 |
LCOR_01015.1 | LCOR_01509.1 | A0A068RHR6 | A0A068RJ71 | Uncharacterized protein. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.919 |
LCOR_01015.1 | LCOR_02137.1 | A0A068RHR6 | A0A068RL39 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.923 |
LCOR_01015.1 | LCOR_03376.1 | A0A068RHR6 | A0A068RS65 | Uncharacterized protein. | Dna-directed rna polymerase ii subunit rpb4-like. | 0.958 |
LCOR_01015.1 | LCOR_03400.1 | A0A068RHR6 | A0A068RNT8 | Uncharacterized protein. | Rna polymerase rpb3 rpb11 dimerization domain-containing protein. | 0.970 |
LCOR_01015.1 | LCOR_04936.1 | A0A068RHR6 | A0A068RTV3 | Uncharacterized protein. | Histone acetylase complex subunit; Belongs to the PI3/PI4-kinase family. | 0.920 |
LCOR_01015.1 | LCOR_05567.1 | A0A068RHR6 | A0A068RVV9 | Uncharacterized protein. | Rna polymerase ii core subunit. | 0.959 |
LCOR_01015.1 | LCOR_05654.1 | A0A068RHR6 | A0A068RZH9 | Uncharacterized protein. | BTP domain-containing protein. | 0.932 |
LCOR_01015.1 | LCOR_09110.1 | A0A068RHR6 | A0A068S7H8 | Uncharacterized protein. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.983 |
LCOR_01015.1 | LCOR_09210.1 | A0A068RHR6 | A0A068S955 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.957 |
LCOR_01509.1 | LCOR_01015.1 | A0A068RJ71 | A0A068RHR6 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | Uncharacterized protein. | 0.919 |
LCOR_01509.1 | LCOR_02137.1 | A0A068RJ71 | A0A068RL39 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.652 |
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