STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_00807.1Vacuolar amino acid transporter 3. (481 aa)    
Predicted Functional Partners:
LCOR_04753.1
Ras-related gtp binding c.
    
 0.711
LCOR_12184.1
Mitogen-activated protein-binding protein-interacting protein.
    
 0.706
LCOR_03782.1
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 0.591
LCOR_05022.1
Peroxisomal nadh pyrophosphatase nudt12.
    
 0.585
LCOR_10476.1
5-amp-activated protein kinase subunit beta-2.
    
  0.559
LCOR_01313.1
Regulatory-associated protein of mtor isoform 1.
     
 0.533
LCOR_00517.1
GLOBIN domain-containing protein; Belongs to the globin family.
   
 
 0.512
LCOR_08129.1
Uncharacterized protein.
   
 
 0.512
LCOR_00394.1
Uncharacterized protein.
    
  0.485
LCOR_01839.1
Traf-type zinc finger protein.
    
  0.485
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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