STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_00817.1Beta-hexosaminidase. (629 aa)    
Predicted Functional Partners:
LCOR_08861.1
Alpha-galactosidase.
   
 
 0.759
LCOR_01905.1
Glycoside family catalytic core.
     
 0.740
LCOR_01393.1
Gpi mannosyltransferase 1-like; Belongs to the glycosyl hydrolase 17 family.
     
 0.738
LCOR_01930.1
Arylsulfatase.
   
 0.729
LCOR_07240.1
Beta galactosidase.
  
 
 0.696
LCOR_11754.1
Beta-galactosidase.
  
 
 0.696
LCOR_08412.1
Alpha-galactosidase.
   
 
 0.693
LCOR_01252.1
Alpha-( )-fucosyltransferase 11.
    
 0.688
LCOR_02609.1
Alpha-( )-fucosyltransferase 11.
    
 0.688
LCOR_08867.1
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
 0.688
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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