STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_02206.1Cytoplasmic protein. (336 aa)    
Predicted Functional Partners:
LCOR_00188.1
Developmentally-regulated gtp-binding protein 1.
   
 
 0.995
LCOR_09242.1
Developmentally-regulated gtp-binding protein 2.
   
 
 0.963
LCOR_00234.1
Elongation factor 3.
   
 
 0.917
LCOR_00233.1
Elongation factor 3.
 
 
 
 0.917
LCOR_02407.1
Elongation factor 3.
   
 
 0.917
LCOR_02406.1
Elongation factor 3.
 
 
 
 0.917
LCOR_03372.1
Translation elongation factor eef3.
   
 
 0.917
LCOR_04340.1
Translation elongation factor eef3.
   
 
 0.917
LCOR_01636.1
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.897
LCOR_09101.1
Mrna export factor elf1.
   
 
 0.876
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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