STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_01068.1Aaa atpase. (1294 aa)    
Predicted Functional Partners:
LCOR_02111.1
3'-5' exonuclease domain-containing protein.
   
 0.994
LCOR_01102.1
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.974
LCOR_10733.1
Double-strand break repair protein mus-23; Belongs to the MRE11/RAD32 family.
   
 0.903
LCOR_12132.1
C2H2-type domain-containing protein.
   
 0.898
LCOR_01029.1
Helicase ATP-binding domain-containing protein.
   
 0.894
LCOR_06195.1
Atp-dependent dna helicase hus2 rqh1.
   
 0.894
LCOR_11730.1
Helicase C-terminal domain-containing protein.
   
 0.894
LCOR_00935.1
Uncharacterized protein.
   
 0.879
LCOR_04445.1
Related to exo1-exonuclease which interacts withmsh2p.
   
 0.879
LCOR_07564.1
Pin domain-like protein.
   
 0.879
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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