STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_01994.1Erg28p. (143 aa)    
Predicted Functional Partners:
LCOR_11329.1
Cytochrome p450; Belongs to the cytochrome P450 family.
   
 
 0.913
LCOR_09587.1
Sterol-4-alpha-carboxylate 3-dehydrogenase.
   
 
 0.887
LCOR_10068.1
Sterol reductase.
   
 
 0.885
LCOR_04821.1
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.879
LCOR_08212.1
Squalene synthetase.
   
 
 0.867
LCOR_03207.1
C-4 methylsterol oxidase; Belongs to the sterol desaturase family.
   
 
 0.725
LCOR_08856.1
C-4 methyl sterol oxidase; Belongs to the sterol desaturase family.
   
 
 0.725
LCOR_06270.1
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 
 0.696
LCOR_10097.1
3-keto-steroid reductase-like.
   
 
 0.696
LCOR_04579.1
C-5 sterol desaturase; Belongs to the sterol desaturase family.
   
 
 0.694
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.