STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_02065.1Pwi domain-containing protein. (330 aa)    
Predicted Functional Partners:
LCOR_08264.1
Wd repeat-containing protein.
    
 0.998
LCOR_03378.1
Pre-mrna splicing factor.
    
 0.989
LCOR_07472.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.989
LCOR_02390.1
Cell cycle control protein.
    
 0.988
LCOR_02216.1
RRM domain-containing protein.
   
 0.987
LCOR_11151.1
Cwf21-domain-containing partial.
   
 0.983
LCOR_04678.1
Uncharacterized protein.
   
 0.978
LCOR_00030.1
Uncharacterized protein.
     
 0.977
LCOR_04616.1
Pre-mrna-splicing factor slu7.
     
 0.977
LCOR_00148.1
Nonsense-mediated mrna decay factor.
    
 
 0.968
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.