STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_02215.1Microtubule binding protein. (266 aa)    
Predicted Functional Partners:
LCOR_00944.1
Microtubule associated protein.
   
 
 0.915
LCOR_10962.1
Bub protein kinase.
   
 0.868
LCOR_07809.1
Mitotic checkpoint protein bub3.
   
 0.863
LCOR_07862.1
Aurora kinase a; Belongs to the protein kinase superfamily.
   
 0.795
LCOR_10549.1
Aur protein kinase; Belongs to the protein kinase superfamily.
   
 0.795
LCOR_04039.1
Protein kinase domain-containing protein.
   
 0.765
LCOR_00616.1
Histone H3; Belongs to the histone H3 family.
   
 0.727
LCOR_01977.1
Histone H3; Belongs to the histone H3 family.
   
 0.727
LCOR_01881.1
Serine/threonine-protein kinase.
     
 0.711
LCOR_07227.1
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 
 0.703
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.