Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LCOR_00089.1 | LCOR_00567.1 | A0A068RH44 | A0A068RIJ2 | Phosphoribosylglycinamide formyltransferase. | Serine hydroxymethyltransferase. | 0.937 |
LCOR_00089.1 | LCOR_02943.1 | A0A068RH44 | A0A068RNV6 | Phosphoribosylglycinamide formyltransferase. | Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. | 0.995 |
LCOR_00089.1 | LCOR_03077.1 | A0A068RH44 | A0A068RMT6 | Phosphoribosylglycinamide formyltransferase. | Phosphoribosylformylglycinamidine synthase. | 0.988 |
LCOR_00089.1 | LCOR_03107.1 | A0A068RH44 | A0A068RMZ8 | Phosphoribosylglycinamide formyltransferase. | Amidophosphoribosyltransferase. | 0.992 |
LCOR_00089.1 | LCOR_04488.1 | A0A068RH44 | A0A068RTR1 | Phosphoribosylglycinamide formyltransferase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.937 |
LCOR_00089.1 | LCOR_05129.1 | A0A068RH44 | A0A068RXU2 | Phosphoribosylglycinamide formyltransferase. | Gmp synthase. | 0.548 |
LCOR_00089.1 | LCOR_05208.1 | A0A068RH44 | A0A068RW16 | Phosphoribosylglycinamide formyltransferase. | -domain-containing protein. | 0.989 |
LCOR_00089.1 | LCOR_05816.1 | A0A068RH44 | A0A068RX75 | Phosphoribosylglycinamide formyltransferase. | Aminoimidazole ribonucleotide synthetase. | 0.999 |
LCOR_00089.1 | LCOR_07380.1 | A0A068RH44 | A0A068S2S5 | Phosphoribosylglycinamide formyltransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | 0.910 |
LCOR_00089.1 | LCOR_10348.1 | A0A068RH44 | A0A068SE73 | Phosphoribosylglycinamide formyltransferase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.991 |
LCOR_00567.1 | LCOR_00089.1 | A0A068RIJ2 | A0A068RH44 | Serine hydroxymethyltransferase. | Phosphoribosylglycinamide formyltransferase. | 0.937 |
LCOR_00567.1 | LCOR_02943.1 | A0A068RIJ2 | A0A068RNV6 | Serine hydroxymethyltransferase. | Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. | 0.872 |
LCOR_00567.1 | LCOR_03077.1 | A0A068RIJ2 | A0A068RMT6 | Serine hydroxymethyltransferase. | Phosphoribosylformylglycinamidine synthase. | 0.861 |
LCOR_00567.1 | LCOR_03107.1 | A0A068RIJ2 | A0A068RMZ8 | Serine hydroxymethyltransferase. | Amidophosphoribosyltransferase. | 0.896 |
LCOR_00567.1 | LCOR_05129.1 | A0A068RIJ2 | A0A068RXU2 | Serine hydroxymethyltransferase. | Gmp synthase. | 0.554 |
LCOR_00567.1 | LCOR_05208.1 | A0A068RIJ2 | A0A068RW16 | Serine hydroxymethyltransferase. | -domain-containing protein. | 0.982 |
LCOR_00567.1 | LCOR_05816.1 | A0A068RIJ2 | A0A068RX75 | Serine hydroxymethyltransferase. | Aminoimidazole ribonucleotide synthetase. | 0.968 |
LCOR_00567.1 | LCOR_07380.1 | A0A068RIJ2 | A0A068S2S5 | Serine hydroxymethyltransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | 0.893 |
LCOR_00567.1 | LCOR_10348.1 | A0A068RIJ2 | A0A068SE73 | Serine hydroxymethyltransferase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.931 |
LCOR_02943.1 | LCOR_00089.1 | A0A068RNV6 | A0A068RH44 | Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. | Phosphoribosylglycinamide formyltransferase. | 0.995 |
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