STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_02997.1Uncharacterized protein; Belongs to the complex I LYR family. (105 aa)    
Predicted Functional Partners:
LCOR_07647.1
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 
 0.658
LCOR_01394.1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.646
LCOR_00831.1
Lyr motif-containing protein 5a; Belongs to the complex I LYR family.
   
  
 0.479
LCOR_01647.1
Trna (Uracil-o-)-methyltransferase protein.
      
 0.453
LCOR_10106.1
Uncharacterized protein.
      
 0.450
LCOR_08230.1
Uncharacterized protein; Belongs to the complex I LYR family.
      
 0.440
LCOR_09121.1
Acetate non-utilizing protein.
      
 0.408
LCOR_04388.1
WD repeat-containing protein.
      
 0.403
LCOR_02280.1
Calcofluor white hypersensitive protein.
      
 0.400
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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