STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_02463.1Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (385 aa)    
Predicted Functional Partners:
LCOR_06692.1
Uncharacterized protein.
    
 0.627
LCOR_03896.1
Uncharacterized protein.
    
 0.545
LCOR_01508.1
Reticulon-like protein.
    
  0.529
LCOR_04123.1
Reticulon-like protein.
    
  0.529
LCOR_10877.1
Pepsinogen 2; Belongs to the peptidase A1 family.
  
     0.510
LCOR_08737.1
Aspartic protease; Belongs to the peptidase A1 family.
  
     0.479
LCOR_07277.1
Probable kex2-endoproteinase of late golgicompartment.
    
 
 0.478
LCOR_09858.1
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
  
     0.472
LCOR_07838.1
A-pheromone processing metallopeptidase ste23; Belongs to the peptidase M16 family.
     
 0.458
LCOR_10741.1
A-pheromone processing metallopeptidase ste23; Belongs to the peptidase M16 family.
     
 0.458
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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