STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_03383.1Hephaestin-like protein 1. (392 aa)    
Predicted Functional Partners:
LCOR_07952.1
Nitrate reductase.
  
 0.765
LCOR_07832.1
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.682
LCOR_01893.1
P-type atpase.
  
 
 0.672
LCOR_03553.1
Copper-transporting atpase.
  
 
 0.672
LCOR_00757.1
Protein ergic-53-like.
    
 0.657
LCOR_11226.1
Arf sar; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.656
LCOR_02228.1
Golgi transport protein; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.642
LCOR_06692.1
Uncharacterized protein.
    
  0.639
LCOR_00518.1
Plasma membrane iron permease.
   
 
 0.637
LCOR_01036.1
Plasma membrane iron permease.
   
 
 0.637
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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