STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_03183.1GATA-type domain-containing protein. (303 aa)    
Predicted Functional Partners:
LCOR_07263.1
Uncharacterized protein.
    
 0.657
LCOR_03973.1
Gcn5p.
    
  0.651
LCOR_06477.1
Protein arginine n-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.596
LCOR_09916.1
Protein arginine n-methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.596
LCOR_01001.1
Histone H2A; Belongs to the histone H2A family.
    
 0.584
LCOR_05025.1
Importin subunit alpha; Belongs to the importin alpha family.
    
   0.529
LCOR_08194.1
Importin subunit alpha; Belongs to the importin alpha family.
    
   0.529
LCOR_05857.1
Histone-lysine n-methyltransferase.
    
  0.522
LCOR_05448.1
Ccaat-binding factor complex subunit.
    
 
 0.515
LCOR_04112.1
Tata-box-binding protein.
    
 0.510
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.