STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_02748.1Thioesterase family protein. (258 aa)    
Predicted Functional Partners:
LCOR_09355.1
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
      0.884
LCOR_00918.1
Thioesterase thiol ester dehydrase-isomerase.
     
 0.619
LCOR_09897.1
Acyl-thioester hydrolase.
     
 0.619
LCOR_00565.1
Bem46 family protein.
     
 0.473
LCOR_00835.1
Bem46 family protein.
     
 0.473
LCOR_00926.1
Alpha beta-hydrolase.
     
 0.473
LCOR_06586.1
Bem46 family protein.
     
 0.473
LCOR_08054.1
Bem46 family protein.
     
 0.473
LCOR_10039.1
Bem46 family protein.
     
 0.473
LCOR_01479.1
Ribosomal rna large subunit methyltransferase n.
    
  0.467
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.