STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_03963.1Pap 25a associated domain family. (682 aa)    
Predicted Functional Partners:
LCOR_10815.1
Serine threonine-protein kinase atr; Belongs to the PI3/PI4-kinase family.
    
  0.654
LCOR_09067.1
Dead-domain-containing protein; Belongs to the DEAD box helicase family.
    
 0.652
LCOR_00435.1
Translation initiation factor 4b.
    
 0.650
LCOR_06087.1
Dead-domain-containing protein; Belongs to the DEAD box helicase family.
    
 0.646
LCOR_10845.1
Dead-domain-containing protein; Belongs to the DEAD box helicase family.
    
 0.646
LCOR_01957.1
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.641
LCOR_02295.1
Eukaryotic translation initiation factor 4e type3; Belongs to the eukaryotic initiation factor 4E family.
    
 0.641
LCOR_02418.1
Uncharacterized protein.
    
 0.641
LCOR_07598.1
Squamous cell carcinoma antigen recognized by t-cells 3-like.
    
 
 0.626
LCOR_05256.1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.611
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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