STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_02962.1D-galacturonic acid reductase. (422 aa)    
Predicted Functional Partners:
LCOR_04238.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.896
LCOR_08289.1
Initiator trna phosphoribosyl transferase.
 
      0.840
LCOR_05096.1
Dtdp-glucose-dehydratase.
  
 
 0.820
LCOR_03401.1
Galactokinase like protein.
  
 0.819
LCOR_11364.1
Galactokinase.
  
 0.819
LCOR_10036.1
Inositol-1-monophosphatase.
    
 0.812
LCOR_11612.1
Inositol oxygenase.
   
 
 0.807
LCOR_05466.1
Glycosyl family 43; Belongs to the glycosyl hydrolase 43 family.
   
  0.769
LCOR_09589.1
Ankyrin repeat protein nuc-2.
  
  0.761
LCOR_03926.1
Glycerophosphodiesterase gde1.
  
  0.757
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.