STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_03582.1Origin recognition complex subunit 5. (977 aa)    
Predicted Functional Partners:
LCOR_00328.1
Origin recognition complex subunit 2.
   
 0.999
LCOR_10471.1
Origin recognition complex subunit 3-like.
  
 0.999
LCOR_11243.1
Uncharacterized protein.
   
 0.999
LCOR_00137.1
DNA helicase; Belongs to the MCM family.
   
 0.998
LCOR_12190.1
DNA helicase; Belongs to the MCM family.
   
 0.998
LCOR_00819.1
DNA helicase; Belongs to the MCM family.
   
 0.996
LCOR_09320.1
DNA helicase; Belongs to the MCM family.
   
 0.995
LCOR_07982.1
DNA helicase; Belongs to the MCM family.
   
 0.991
MCM7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
   
 0.990
LCOR_00681.1
Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family.
    
 
 0.965
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.