STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_03889.1Hit family protein 1. (141 aa)    
Predicted Functional Partners:
LCOR_04112.1
Tata-box-binding protein.
   
 0.803
LCOR_06544.1
Tata-box-binding protein.
   
 0.803
LCOR_07952.1
Nitrate reductase.
  
  0.800
LCOR_06325.1
Uncharacterized protein.
    
 0.782
LCOR_06792.1
Cmgc cdk cdk7 protein kinase; Belongs to the protein kinase superfamily.
    
 0.777
LCOR_04250.1
BTB domain-containing protein.
   
 0.766
LCOR_05714.1
Uncharacterized protein.
   
 0.766
LCOR_07038.1
Cdk-activating kinase assembly factor.
    
 0.722
LCOR_11575.1
NDK domain-containing protein.
  
 0.714
LCOR_06232.1
Rna polymerase i.
   
 
  0.680
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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