STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_04007.1Chromo domain-containing protein. (313 aa)    
Predicted Functional Partners:
LCOR_00616.1
Histone H3; Belongs to the histone H3 family.
   
 0.958
LCOR_01977.1
Histone H3; Belongs to the histone H3 family.
   
 0.958
LCOR_04050.1
3-ketoacyl-thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.866
LCOR_09152.1
3-ketoacyl-coa thiolase peroxisomal a; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.866
LCOR_02865.1
3-ketoacyl-mitochondrial.
  
 0.859
LCOR_03447.1
Acetyl-c-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.859
LCOR_09080.1
Acetyl-cytosolic 1-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.859
LCOR_09989.1
Acetyl-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.859
LCOR_03607.1
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.854
LCOR_06282.1
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.854
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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