STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_03398.1Asparagine synthetase. (567 aa)    
Predicted Functional Partners:
LCOR_09843.1
Ubiquitin-conjugating enzyme 9; Belongs to the ubiquitin-conjugating enzyme family.
 
    
 0.855
LCOR_10157.1
Homoserine dehydrogenase.
  
 
 0.854
LCOR_02505.1
Argininosuccinate synthetase.
   
 0.839
LCOR_07380.1
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 
 0.818
LCOR_02618.1
Aspartate aminotransferase.
   
 
 0.810
LCOR_02460.1
Threonine aspartase 1-like.
     
 0.805
LCOR_02564.1
60 kDa lysophospholipase-like.
     
 0.804
LCOR_05436.1
Aspartokinase.
  
 
 0.802
LCOR_07370.1
Aspartokinase.
  
 
 0.802
LCOR_00938.1
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
 0.794
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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