STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_04201.1Diaminohydroxyphosphoribosylamino-pyrimidinedeaminase. (174 aa)    
Predicted Functional Partners:
LCOR_09436.1
Gtp cyclohydrolase-2.
 
  
 0.835
LCOR_10074.1
Trna-specific adenosine deaminase-like protein3.
   
 0.825
LCOR_11532.1
Histone lysine methyltransferase set7.
   
 0.825
LCOR_11510.1
Related to rib7-htp reductase.
 
  
 0.797
LCOR_08003.1
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 
 0.792
LCOR_00563.1
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
  0.734
LCOR_09783.1
Thymidylate synthase.
  
 
 0.715
LCOR_07928.1
Ser thr protein phosphatase.
    
 0.706
LCOR_01041.1
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
 0.687
LCOR_07686.1
Protein zeu1.
    
 0.684
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
Server load: low (10%) [HD]