Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LCOR_00472.1 | LCOR_01338.1 | A0A068RG50 | A0A068RIR3 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Transcription factor tfiib. | 0.989 |
LCOR_00472.1 | LCOR_03016.1 | A0A068RG50 | A0A068RR03 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Uncharacterized protein. | 0.991 |
LCOR_00472.1 | LCOR_03376.1 | A0A068RG50 | A0A068RS65 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Dna-directed rna polymerase ii subunit rpb4-like. | 0.999 |
LCOR_00472.1 | LCOR_03400.1 | A0A068RG50 | A0A068RNT8 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Rna polymerase rpb3 rpb11 dimerization domain-containing protein. | 0.999 |
LCOR_00472.1 | LCOR_04360.1 | A0A068RG50 | A0A068RTA6 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Dna-directed rna polymerases and iii subunitrpabc5-like. | 0.999 |
LCOR_00472.1 | LCOR_04530.1 | A0A068RG50 | A0A068RTV5 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Uncharacterized protein. | 0.854 |
LCOR_00472.1 | LCOR_05567.1 | A0A068RG50 | A0A068RVV9 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Rna polymerase ii core subunit. | 0.999 |
LCOR_00472.1 | LCOR_06232.1 | A0A068RG50 | A0A068RZB0 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Rna polymerase i. | 0.999 |
LCOR_00472.1 | LCOR_07659.1 | A0A068RG50 | A0A068S461 | Dna-directed rna polymerases and iii subunitrpabc2-like. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.995 |
LCOR_00472.1 | LCOR_09210.1 | A0A068RG50 | A0A068S955 | Dna-directed rna polymerases and iii subunitrpabc2-like. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
LCOR_01338.1 | LCOR_00472.1 | A0A068RIR3 | A0A068RG50 | Transcription factor tfiib. | Dna-directed rna polymerases and iii subunitrpabc2-like. | 0.989 |
LCOR_01338.1 | LCOR_03376.1 | A0A068RIR3 | A0A068RS65 | Transcription factor tfiib. | Dna-directed rna polymerase ii subunit rpb4-like. | 0.992 |
LCOR_01338.1 | LCOR_03400.1 | A0A068RIR3 | A0A068RNT8 | Transcription factor tfiib. | Rna polymerase rpb3 rpb11 dimerization domain-containing protein. | 0.992 |
LCOR_01338.1 | LCOR_04360.1 | A0A068RIR3 | A0A068RTA6 | Transcription factor tfiib. | Dna-directed rna polymerases and iii subunitrpabc5-like. | 0.988 |
LCOR_01338.1 | LCOR_04530.1 | A0A068RIR3 | A0A068RTV5 | Transcription factor tfiib. | Uncharacterized protein. | 0.847 |
LCOR_01338.1 | LCOR_05567.1 | A0A068RIR3 | A0A068RVV9 | Transcription factor tfiib. | Rna polymerase ii core subunit. | 0.988 |
LCOR_01338.1 | LCOR_06232.1 | A0A068RIR3 | A0A068RZB0 | Transcription factor tfiib. | Rna polymerase i. | 0.991 |
LCOR_01338.1 | LCOR_07659.1 | A0A068RIR3 | A0A068S461 | Transcription factor tfiib. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.806 |
LCOR_01338.1 | LCOR_09210.1 | A0A068RIR3 | A0A068S955 | Transcription factor tfiib. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.989 |
LCOR_03016.1 | LCOR_00472.1 | A0A068RR03 | A0A068RG50 | Uncharacterized protein. | Dna-directed rna polymerases and iii subunitrpabc2-like. | 0.991 |
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