STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_03902.13-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (452 aa)    
Predicted Functional Partners:
LCOR_03256.1
Mitochondrial 37s ribosomal protein mrp4.
    
 
 0.900
LCOR_05356.1
50s ribosomal protein l19.
  
   0.885
LCOR_11867.1
40s ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.883
LCOR_02998.1
30s ribosomal protein s17.
    
 
 0.880
LCOR_01343.1
Uncharacterized protein.
    
 
 0.879
LCOR_05889.1
50s ribosomal protein l4.
 
  
   0.878
LCOR_01400.1
S15 ns1 rna-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
 
 0.877
LCOR_04140.1
Mitochondrial 37s ribosomal protein rsm10.
    
 
 0.876
LCOR_05333.1
37s ribosomal protein.
    
 
 0.876
LCOR_05181.1
Uncharacterized protein.
    
 
 0.875
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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