STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_04514.1Arf-GAP domain-containing protein. (532 aa)    
Predicted Functional Partners:
LCOR_00133.1
DH domain-containing protein.
    
 0.976
LCOR_05410.1
Rho guanyl-nucleotide exchange factor.
    
 0.976
LCOR_02440.1
Uba ts-n domain containing protein.
    
 0.787
LCOR_07516.1
Actin cytoskeleton-regulatory complex proteinpan1.
    
 0.787
LCOR_08463.1
Uncharacterized protein.
    
 0.787
LCOR_09720.1
Vesicle-associated membrane protein 714; Belongs to the synaptobrevin family.
    
 0.773
LCOR_09621.1
Vesicle-associated membrane protein 714-like; Belongs to the synaptobrevin family.
    
 0.773
LCOR_11534.1
UBA domain-containing protein.
    
 0.730
LCOR_09150.1
Class e vacuolar protein-sorting machineryprotein hse1.
     
 0.683
LCOR_04450.1
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.681
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.