STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_05080.1Uncharacterized protein. (314 aa)    
Predicted Functional Partners:
LCOR_03846.1
Uncharacterized protein.
   
 0.997
LCOR_10772.1
Uncharacterized protein.
   
 0.997
LCOR_00959.1
Nucleoporin nup189.
    
 0.964
LCOR_01480.1
RRM Nup35-type domain-containing protein.
    
 0.906
LCOR_01498.1
Related to mrna export factor mex67.
    
 0.865
LCOR_07556.1
NTF2 domain-containing protein.
    
 0.865
LCOR_10511.1
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.859
LCOR_01405.1
Nucleoporin nup44.
   
 0.832
LCOR_02632.1
Nucleoporin nup44.
   
 0.832
LCOR_07005.1
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.831
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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