STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_04750.1Uncharacterized protein. (424 aa)    
Predicted Functional Partners:
LCOR_10926.1
Actin-like 6a; Belongs to the actin family.
    
 0.838
LCOR_09793.1
Uncharacterized protein.
    
 0.832
LCOR_01123.1
Swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily d member 1-like.
    
 0.797
LCOR_11753.1
Swi snf matrix actin dependent regulator ofsubfamily member 1.
    
 0.797
LCOR_06262.1
Histone h2a deubiquitinase mysm1.
    
 0.791
LCOR_01873.1
Swi-snf complex subunit.
    
 0.766
LCOR_06234.1
Swi-snf complex subunit.
    
 0.766
LCOR_07143.1
Swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily b member 1.
    
 0.766
LCOR_00857.1
Swirm-domain-containing protein.
    
 0.718
LCOR_04696.1
Swi snf complex protein.
    
 0.718
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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