STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_05460.1Cell division control protein. (1157 aa)    
Predicted Functional Partners:
LCOR_00866.1
SH3 domain-containing protein.
   
 0.807
LCOR_09317.1
SH3 domain-containing protein.
   
0.807
LCOR_01683.1
Cc42_canal cell division control protein 42.
    
 0.716
LCOR_07636.1
Cc42_canal cell division control protein 42.
    
 0.716
LCOR_04024.1
Ras-related c3 botulinum toxin substrate 1 (Rhosmall gtp binding protein rac1).
    
 0.706
LCOR_04686.1
Ras-related c3 botulinum toxin substrate 1 (Rhosmall gtp binding protein rac1).
    
 0.706
LCOR_08648.1
Small gtpase rac1.
    
 0.706
LCOR_00430.1
Ras protein.
    
 0.695
LCOR_00431.1
Ras-related protein rap-1b.
    
 0.695
LCOR_04610.1
Ras-like protein.
    
 0.695
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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