STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_04617.1Uncharacterized protein. (191 aa)    
Predicted Functional Partners:
LCOR_07952.1
Nitrate reductase.
    
 0.753
LCOR_07341.1
Uncharacterized protein.
    
 0.696
LCOR_11575.1
NDK domain-containing protein.
    
 0.661
LCOR_12184.1
Mitogen-activated protein-binding protein-interacting protein.
    
  0.659
LCOR_05181.1
Uncharacterized protein.
    
  0.655
LCOR_08935.1
Ylr063w-like protein.
   
  0.655
LCOR_03256.1
Mitochondrial 37s ribosomal protein mrp4.
   
  0.652
LCOR_06512.1
30s ribosomal protein s16.
   
  0.650
LCOR_01400.1
S15 ns1 rna-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.649
LCOR_11867.1
40s ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family.
    
  0.647
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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