STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_05732.1Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
LCOR_07672.1
60s ribosomal protein l32.
   
 0.995
LCOR_09881.1
60s ribosomal protein l34-b.
   
 0.995
LCOR_00481.1
60s ribosomal protein l3; Belongs to the universal ribosomal protein uL3 family.
   
 0.994
LCOR_01636.1
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.994
LCOR_02310.1
60s ribosomal protein l27a; Belongs to the universal ribosomal protein uL15 family.
   
 0.994
LCOR_02665.1
60s ribosomal protein l12; Belongs to the universal ribosomal protein uL11 family.
   
 0.994
LCOR_03652.1
Ribosomal protein l28e.
   
 0.994
LCOR_03439.1
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.994
LCOR_05581.1
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.994
LCOR_07153.1
60s ribosomal protein l16; Belongs to the universal ribosomal protein uL13 family.
  
 0.994
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.