STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_04840.1Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
LCOR_07952.1
Nitrate reductase.
   
 0.794
LCOR_09744.1
Acetylserotonin o-methyltransferase-like.
     
 0.785
LCOR_10049.1
Tryptophan synthase.
    
 0.760
LCOR_01394.1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.741
LCOR_05303.1
Sulfite oxidase-like.
     
 0.732
LCOR_06158.1
Epoxide hydrolase.
   
 0.716
LCOR_07870.1
Epoxide hydrolase.
   
 0.716
LCOR_02111.1
3'-5' exonuclease domain-containing protein.
    
 0.708
LCOR_10733.1
Double-strand break repair protein mus-23; Belongs to the MRE11/RAD32 family.
    
 0.685
LCOR_04821.1
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.684
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
Server load: low (20%) [HD]