STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_05816.1Aminoimidazole ribonucleotide synthetase. (790 aa)    
Predicted Functional Partners:
LCOR_00089.1
Phosphoribosylglycinamide formyltransferase.
 
 0.999
LCOR_02943.1
Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.
 0.998
LCOR_03107.1
Amidophosphoribosyltransferase.
 0.997
LCOR_10348.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.992
LCOR_05208.1
-domain-containing protein.
  
 0.989
LCOR_03077.1
Phosphoribosylformylglycinamidine synthase.
 
 
 0.988
LCOR_00567.1
Serine hydroxymethyltransferase.
  
 0.968
LCOR_04488.1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.968
LCOR_11826.1
Methylenetetrahydrofolate dehydrogenase.
  
 
 0.953
LCOR_08632.1
Fthfs-domain-containing protein.
 
 0.946
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.