STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_05653.1Wd-repeat-containing protein. (922 aa)    
Predicted Functional Partners:
LCOR_02458.1
Gtp binding protein.
   
 
 0.999
LCOR_03431.1
Uncharacterized protein.
   
 0.999
LCOR_06829.1
Wd repeat-containing protein 43.
   
 0.999
LCOR_07641.1
U3 small nucleolar rna-associated protein 6homolog.
   
 0.999
LCOR_09890.1
Utp21-domain-containing protein.
   
0.999
LCOR_10028.1
U3 small nucleolar rna-associated protein 18homolog.
   
 0.999
LCOR_00907.1
Bystin.
   
 
 0.998
LCOR_01711.1
Wd40 repeat-like protein.
   
0.998
LCOR_02540.1
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 
 0.998
LCOR_03246.1
Loc398558 protein.
   
 
 0.998
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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