STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_06247.1Fyve domain. (226 aa)    
Predicted Functional Partners:
LCOR_01857.1
Protein kinase domain-containing protein.
    
 0.756
LCOR_04087.1
Vacuolar membrane protein.
    
 0.756
LCOR_05769.1
Vacuolar membrane protein.
    
 0.756
LCOR_07508.1
Uncharacterized protein.
    
 0.756
LCOR_04464.1
Ras-related protein rab-4b.
    
 0.713
LCOR_00553.1
Ras-related gtp-binding protein.
     
 0.687
LCOR_01950.1
Prohibitin.
    
  0.664
LCOR_04753.1
Ras-related gtp binding c.
    
 
 0.647
LCOR_00477.1
Prohibitin.
    
  0.643
LCOR_11410.1
Prohibitin.
    
  0.643
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.