STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_05424.1Mrna cleavage factor complex component. (690 aa)    
Predicted Functional Partners:
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
    
 0.999
LCOR_08513.1
Mrna 3-end-processing protein rna14.
    
 0.997
LCOR_07995.1
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.994
LCOR_08621.1
Cleavage polyadenylation specificity factor.
    
 0.993
LCOR_00156.1
Cleavage and polyadenylation specificity factorsubunit 3-like.
    
 0.992
LCOR_09524.1
Cleavage stimulation factor subunit 2-like.
    
 0.992
LCOR_09964.1
Cleavage and polyadenylation specificity factorsubunit 1.
    
 0.992
LCOR_02952.1
DUF1775 domain-containing protein.
    
 0.982
LCOR_05202.1
Phosphoglycerate mutase.
    
 0.982
LCOR_09019.1
Fip1 domain-containing protein.
    
 0.978
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.