STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_06554.1Uncharacterized protein. (243 aa)    
Predicted Functional Partners:
LCOR_03926.1
Glycerophosphodiesterase gde1.
    
 0.749
LCOR_06219.1
Glycerophosphocholine phosphodiesterase.
    
 0.749
LCOR_09589.1
Ankyrin repeat protein nuc-2.
   
 0.696
LCOR_01765.1
Ubiquitin-40s ribosomal protein s31 fusionprotein.
    
  0.683
LCOR_10533.1
Nedd8.
    
  0.682
LCOR_07341.1
Uncharacterized protein.
   
 0.680
LCOR_02322.1
Serine/threonine-protein phosphatase.
   
  0.674
LCOR_07635.1
Serine threonine-protein phosphatase pp1-1.
   
  0.674
LCOR_01789.1
Elongation factor siii p15; Belongs to the SKP1 family.
    
 0.672
LCOR_00770.1
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.665
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.