STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_06234.1Swi-snf complex subunit. (499 aa)    
Predicted Functional Partners:
LCOR_10926.1
Actin-like 6a; Belongs to the actin family.
   
 0.974
LCOR_01123.1
Swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily d member 1-like.
   
 0.973
LCOR_09793.1
Uncharacterized protein.
    
 0.969
LCOR_11753.1
Swi snf matrix actin dependent regulator ofsubfamily member 1.
   
 0.960
LCOR_03480.1
Serine/threonine-protein phosphatase.
   
 0.897
LCOR_04988.1
Rsc complex subunit.
   
 0.897
LCOR_09474.1
Serine/threonine-protein phosphatase.
   
 0.897
LCOR_00857.1
Swirm-domain-containing protein.
   
 0.894
LCOR_04696.1
Swi snf complex protein.
   
 0.894
LCOR_11225.1
Smarcc1 protein.
   
 0.894
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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