STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_06410.1Arf-gap with coiled-ank repeat and ph domain-containing protein 2. (730 aa)    
Predicted Functional Partners:
LCOR_03677.1
Cps1 protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.733
LCOR_07290.1
Ap-domain-containing protein.
    
0.711
LCOR_01685.1
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
     
 0.657
LCOR_07559.1
Arf gtpase-activating protein.
    
0.656
LCOR_08482.1
Adp-ribosylation factor gtpase-activatingprotein agd10.
    
0.656
LCOR_01559.1
Adp-ribosylation factor gtpase-activatingprotein 1-like.
   
0.643
LCOR_07783.1
Arf-GAP domain-containing protein.
   
0.643
LCOR_05549.1
Gtpase activating protein for arf.
    
0.631
LCOR_01617.1
Gtp-binding protein ypt3.
    
 0.579
LCOR_02750.1
Gtp-binding protein ypt3.
    
 0.579
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
Server load: low (14%) [HD]