Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LCOR_02318.1 | LCOR_02617.1 | A0A068RKC8 | A0A068RMK2 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription factor iws1. | 0.972 |
| LCOR_02318.1 | LCOR_03194.1 | A0A068RKC8 | A0A068RN70 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription elongation factor. | 0.983 |
| LCOR_02318.1 | LCOR_03400.1 | A0A068RKC8 | A0A068RNT8 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Rna polymerase rpb3 rpb11 dimerization domain-containing protein. | 0.981 |
| LCOR_02318.1 | LCOR_05361.1 | A0A068RKC8 | A0A068RVQ2 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. | 0.978 |
| LCOR_02318.1 | LCOR_05567.1 | A0A068RKC8 | A0A068RVV9 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Rna polymerase ii core subunit. | 0.961 |
| LCOR_02318.1 | LCOR_06232.1 | A0A068RKC8 | A0A068RZB0 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Rna polymerase i. | 0.846 |
| LCOR_02318.1 | LCOR_06436.1 | A0A068RKC8 | A0A068RZU7 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | EAF domain-containing protein. | 0.967 |
| LCOR_02318.1 | LCOR_07659.1 | A0A068RKC8 | A0A068S461 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.859 |
| LCOR_02318.1 | LCOR_08365.1 | A0A068RKC8 | A0A068S627 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.882 |
| LCOR_02318.1 | LCOR_09210.1 | A0A068RKC8 | A0A068S955 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.886 |
| LCOR_02617.1 | LCOR_02318.1 | A0A068RMK2 | A0A068RKC8 | Transcription factor iws1. | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | 0.972 |
| LCOR_02617.1 | LCOR_03194.1 | A0A068RMK2 | A0A068RN70 | Transcription factor iws1. | Transcription elongation factor. | 0.990 |
| LCOR_02617.1 | LCOR_03400.1 | A0A068RMK2 | A0A068RNT8 | Transcription factor iws1. | Rna polymerase rpb3 rpb11 dimerization domain-containing protein. | 0.962 |
| LCOR_02617.1 | LCOR_05361.1 | A0A068RMK2 | A0A068RVQ2 | Transcription factor iws1. | Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. | 0.999 |
| LCOR_02617.1 | LCOR_05567.1 | A0A068RMK2 | A0A068RVV9 | Transcription factor iws1. | Rna polymerase ii core subunit. | 0.897 |
| LCOR_02617.1 | LCOR_06232.1 | A0A068RMK2 | A0A068RZB0 | Transcription factor iws1. | Rna polymerase i. | 0.733 |
| LCOR_02617.1 | LCOR_06436.1 | A0A068RMK2 | A0A068RZU7 | Transcription factor iws1. | EAF domain-containing protein. | 0.969 |
| LCOR_02617.1 | LCOR_07659.1 | A0A068RMK2 | A0A068S461 | Transcription factor iws1. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.943 |
| LCOR_02617.1 | LCOR_08365.1 | A0A068RMK2 | A0A068S627 | Transcription factor iws1. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.971 |
| LCOR_02617.1 | LCOR_09210.1 | A0A068RMK2 | A0A068S955 | Transcription factor iws1. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.880 |
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