STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_06844.1Translation elongation factor 1-beta (Ef-1-beta); Belongs to the EF-1-beta/EF-1-delta family. (297 aa)    
Predicted Functional Partners:
LCOR_06902.1
Glutathione s-transferase.
  
 0.999
LCOR_06900.1
Elongation factor 1-gamma.
  
 0.999
LCOR_11064.1
Elongation factor 1 gamma domain-containingprotein; Belongs to the GST superfamily.
  
 0.999
LCOR_08329.1
Valyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.996
LCOR_02665.1
60s ribosomal protein l12; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.934
LCOR_03439.1
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 
 0.934
LCOR_06849.1
Phenylalanyl-trna beta subunit.
 
 
    0.933
LCOR_06989.1
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.931
LCOR_03684.1
40s ribosomal protein s13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.924
LCOR_02310.1
60s ribosomal protein l27a; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.921
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.