STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_06849.1Phenylalanyl-trna beta subunit. (597 aa)    
Predicted Functional Partners:
LCOR_09608.1
Phenylalanyl-trna synthetase alpha chain.
  
 0.999
LCOR_00256.1
Phenylalanyl-trna synthetase.
  
 0.998
LCOR_10055.1
Tyrosine--tRNA ligase.
  
  
 0.953
LCOR_03729.1
Isoleucine-trna ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.945
LCOR_09310.1
Leucine-trna ligase.
  
  
 0.937
LCOR_11531.1
Leucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.937
LCOR_07814.1
Isoleucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.935
LCOR_06844.1
Translation elongation factor 1-beta (Ef-1-beta); Belongs to the EF-1-beta/EF-1-delta family.
 
 
    0.933
LCOR_10739.1
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
 
 
    0.933
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.879
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.