STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_05813.1Dna damage-binding protein 1a. (1135 aa)    
Predicted Functional Partners:
LCOR_03016.1
Uncharacterized protein.
    
 
 0.989
LCOR_12185.1
Excision repair cross-complementing rodentrepair complementation group 8.
    
 0.978
LCOR_01828.1
Ring-box protein 1.
    
 0.977
LCOR_08462.1
Denticleless protein homolog.
    
 0.977
LCOR_11694.1
Wd repeat-containing protein.
    
 0.976
LCOR_05607.1
Wd repeat-containing protein.
    
 0.967
LCOR_10551.1
Dna repair and recombination protein rad26.
    
 0.963
LCOR_01241.1
Ubiquitin-protein cullin 4; Belongs to the cullin family.
  
 0.959
LCOR_12192.1
Cullin-4b isoform 2; Belongs to the cullin family.
  
 0.957
LCOR_04215.1
Cop9 signalosome complex subunit 1.
    
 0.953
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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