STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_06520.1Cell wall protein ecm33. (392 aa)    
Predicted Functional Partners:
LCOR_02165.1
Uridine kinase; Belongs to the uridine kinase family.
    
 0.809
LCOR_03260.1
Uracil phosphoribosyltransferase.
    
 0.809
LCOR_04541.1
Prtase-like protein.
    
 0.809
LCOR_10591.1
Uracil phosphoribosyltransferase.
    
 0.809
LCOR_12333.1
Uridine-cytidine kinase 1 isoform 1.
    
 0.809
LCOR_08526.1
Nicotinamide riboside kinase.
    
 0.793
LCOR_03044.1
Fh2-domain-containing protein.
    
 0.664
LCOR_03992.1
Uncharacterized protein.
    
 0.642
LCOR_05576.1
Uncharacterized protein.
    
 0.642
LCOR_03263.1
Presenilin 1.
    
 0.611
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
Server load: low (26%) [HD]