STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_05822.1Zip zinc. (357 aa)    
Predicted Functional Partners:
LCOR_04354.1
Protein transporter sec61 subunit variant; Belongs to the SecY/SEC61-alpha family.
   
  
 0.611
LCOR_10834.1
Probable endoplasmic reticulum insertion proteinsec61; Belongs to the SecY/SEC61-alpha family.
   
  
 0.611
LCOR_12187.1
Uncharacterized protein.
  
 0.607
LCOR_11287.1
Uncharacterized protein.
   
 
  0.606
LCOR_01413.1
Prefoldin subunit 6.
   
  
 0.568
LCOR_10530.1
Zinc transporter 1.
  
 0.532
LCOR_10531.1
Potential vacuolar cation transporter.
  
 0.532
LCOR_00374.1
Next to brca1 protein 1 protein.
   
  
 0.528
LCOR_01507.1
Zrt2p.
   
 
 0.525
LCOR_10590.1
Zip-like iron-zinc transporter.
   
 
 0.525
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.