STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_06553.1Nucleolar essential protein 1. (261 aa)    
Predicted Functional Partners:
LCOR_02798.1
Small nucleolar ribonucleoprotein complexsubunit.
   
  0.999
LCOR_02808.1
Fcf1-domain-containing protein.
   
 0.999
LCOR_03781.1
Ribosome biogenesis protein.
   
 0.999
LCOR_06299.1
Ribosomal rna assembly protein mis3.
  
 0.999
LCOR_07929.1
Nop14-like protein.
   
 0.999
LCOR_11479.1
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.999
LCOR_03610.1
U3 snornp-associated protein rrp5.
   
 0.998
LCOR_05200.1
Heat repeat protein.
   
 0.998
LCOR_01318.1
40s ribosomal protein s9; Belongs to the universal ribosomal protein uS4 family.
   
  0.998
LCOR_09746.1
U3 snornp-associated protein utp7.
   
 0.998
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.