STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_06718.1Pseudouridine-5-monophosphatase-like. (246 aa)    
Predicted Functional Partners:
LCOR_09447.1
Riboflavin kinase.
   
 0.968
LCOR_01263.1
Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.
   
 0.819
LCOR_02931.1
Class v.
    
 0.805
LCOR_02797.1
Alpha-amylase a type-1 2.
  
 
 0.800
LCOR_10854.1
Alpha-amylase.
  
 
 0.800
LCOR_02780.1
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.787
LCOR_06229.1
-alpha-glucan branching enzyme.
  
 
 0.778
LCOR_11572.1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
  
 0.771
LCOR_06458.1
Glycerol kinase; Belongs to the FGGY kinase family.
  
 0.763
LCOR_04830.1
Mannose-6-phosphate isomerase.
   
 0.744
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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