STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_06138.1Uncharacterized protein. (246 aa)    
Predicted Functional Partners:
LCOR_10049.1
Tryptophan synthase.
    
  0.748
LCOR_08003.1
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 
 0.743
LCOR_10388.1
Protein.
    
 0.643
LCOR_06147.1
L-galactose dehydrogenase.
  
 0.642
LCOR_03816.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.640
LCOR_00036.1
Aldo keto reductase.
  
 0.603
LCOR_01359.1
Voltage-dependent potassium channel subunitbeta.
  
 0.603
LCOR_01807.1
Aldo keto reductase.
  
 0.603
LCOR_04109.1
Aldo keto reductase.
  
 0.603
LCOR_03934.1
Aldo keto reductase.
  
 0.603
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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