LCOR_07047.1 protein (Lichtheimia corymbifera)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LCOR_07047.1

TPR_REGION domain-containing protein. (707 aa)

Predicted Functional Partners:

LCOR_03016.1

0.966

LCOR_10041.1

0.802

LCOR_05750.1

0.801

LCOR_01735.1

0.799

LCOR_00456.1

0.794

LCOR_05432.1

0.794

LCOR_11287.1

0.794

LCOR_03701.1

0.793

LCOR_11292.1

0.792

LCOR_08106.1

0.787

Your Current Organism:

Lichtheimia corymbifera

NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LCOR_00456.1	LCOR_01735.1	A0A068RGB4	A0A068RK81	Uncharacterized protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.999
LCOR_00456.1	LCOR_03701.1	A0A068RGB4	A0A068RPT4	Uncharacterized protein.	Anaphase-promoting complex subunit apc11.	0.999
LCOR_00456.1	LCOR_05432.1	A0A068RGB4	A0A068RVX5	Uncharacterized protein.	Anaphase-promoting complex subunit 1.	0.999
LCOR_00456.1	LCOR_05750.1	A0A068RGB4	A0A068RWK4	Uncharacterized protein.	Anaphase-promoting complex component.	0.999
LCOR_00456.1	LCOR_07047.1	A0A068RGB4	A0A068S112	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.794
LCOR_00456.1	LCOR_08106.1	A0A068RGB4	A0A068S7A9	Uncharacterized protein.	Anaphase-promoting complex subunit 2; Belongs to the cullin family.	0.999
LCOR_00456.1	LCOR_11292.1	A0A068RGB4	A0A068SFB9	Uncharacterized protein.	Uncharacterized protein.	0.999
LCOR_01735.1	LCOR_00456.1	A0A068RK81	A0A068RGB4	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Uncharacterized protein.	0.999
LCOR_01735.1	LCOR_03701.1	A0A068RK81	A0A068RPT4	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Anaphase-promoting complex subunit apc11.	0.999
LCOR_01735.1	LCOR_05432.1	A0A068RK81	A0A068RVX5	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Anaphase-promoting complex subunit 1.	0.999
LCOR_01735.1	LCOR_05750.1	A0A068RK81	A0A068RWK4	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Anaphase-promoting complex component.	0.999
LCOR_01735.1	LCOR_07047.1	A0A068RK81	A0A068S112	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	TPR_REGION domain-containing protein.	0.799
LCOR_01735.1	LCOR_08106.1	A0A068RK81	A0A068S7A9	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Anaphase-promoting complex subunit 2; Belongs to the cullin family.	0.999
LCOR_01735.1	LCOR_11292.1	A0A068RK81	A0A068SFB9	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Uncharacterized protein.	0.999
LCOR_03016.1	LCOR_07047.1	A0A068RR03	A0A068S112	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.966
LCOR_03016.1	LCOR_10041.1	A0A068RR03	A0A068SA95	Uncharacterized protein.	Cdc73 domain protein.	0.999
LCOR_03016.1	LCOR_11287.1	A0A068RR03	A0A068SFA2	Uncharacterized protein.	Uncharacterized protein.	0.999
LCOR_03701.1	LCOR_00456.1	A0A068RPT4	A0A068RGB4	Anaphase-promoting complex subunit apc11.	Uncharacterized protein.	0.999
LCOR_03701.1	LCOR_01735.1	A0A068RPT4	A0A068RK81	Anaphase-promoting complex subunit apc11.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.999
LCOR_03701.1	LCOR_05432.1	A0A068RPT4	A0A068RVX5	Anaphase-promoting complex subunit apc11.	Anaphase-promoting complex subunit 1.	0.999

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Network Stats

number of nodes:

10

number of edges:

33

average node degree:

6.6

avg. local clustering coefficient:

0.861

expected number of edges:

9

PPI enrichment p-value:

1.72e-09

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006749

Glutathione metabolic process

3 of 6

2.51

1.97

0.00028

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0050313

Sulfur dioxygenase activity

3 of 3

2.82

2.49

3.75e-05

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:2632

Mixed, incl. Methylglyoxal catabolic process, and Rhodanese Homology Domain

8 of 24

2.34

6.64

7.77e-15

CL:2664

Sulphur transport, and Sulfite exporter TauE/SafE

5 of 8

2.61

4.73

1.48e-09

CL:2636

Rhodanese Homology Domain, and Methylglyoxal catabolic process

3 of 11

2.25

1.88

0.00032

CL:2638

Mixed, incl. Sulfur dioxygenase activity, and tRNA pseudouridine synthesis

2 of 6

2.34

1.05

0.0134

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00620

Pyruvate metabolism

3 of 46

1.63

1.08

0.0061

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF04143

Sulphur transport

3 of 4

2.69

2.32

7.10e-05

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR036873

Rhodanese-like domain superfamily

4 of 9

2.46

2.94

3.71e-06

IPR001763

Rhodanese-like domain

4 of 9

2.46

2.94

3.71e-06

IPR044528

Persulfide dioxygenase-like, MBL-fold metallo-hydrolase domain

3 of 3

2.82

2.52

3.25e-05

IPR007272

Sulphur transport domain

3 of 3

2.82

2.52

3.25e-05

IPR001279

Metallo-beta-lactamase

3 of 17

2.06

1.56

0.0011

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00450

Rhodanese Homology Domain

4 of 8

2.51

3.58

2.16e-07

SM00849

Metallo-beta-lactamase superfamily

3 of 16

2.09

1.93

0.00020

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