STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_07274.1Amine oxidase. (676 aa)    
Predicted Functional Partners:
LCOR_08003.1
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
     
 0.770
LCOR_05022.1
Peroxisomal nadh pyrophosphatase nudt12.
     
 0.742
LCOR_00250.1
Uncharacterized protein.
    
  0.654
LCOR_07478.1
Uncharacterized protein.
    
  0.654
LCOR_08396.1
Uncharacterized protein.
    
  0.654
LCOR_09779.1
Duf323 domain-containing protein.
    
  0.654
LCOR_10646.1
Tyrosine aminotransferase.
     
 0.641
LCOR_07003.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.631
LCOR_08069.1
Guanylate kinase-like domain-containing protein.
    
  0.622
LCOR_10591.1
Uracil phosphoribosyltransferase.
   
 
  0.619
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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